Vicky Choi

Position:

Assistant Professor

Research Interests:

Teaching

CS 4104 Data and Algorithm Analysis
CS 5104 Computability and Formal Languages
CS 5114 Theory of Algorithms
CS 5124 Algorithms in Bioinformatics
CS 5984 Algorithms in Structural Bioinformatics
CS 6104 Quantum Computation

Selected Publications

Minor-Embedding in Adiabatic Quantum Computation: I. The Parameter Setting Problem. Quantum Information Processing, Volume 7, Number 5, 2008, page 193 -- 209.

Faster Algorithms for Constructing a Galois/Concept Lattice. Presented at SIAM Conference on Discrete Mathematics 2006, University of Victoria, Canada.

Microarray Data Analysis (with Reinhard Laubenbacher, Karen Duca, Vy Lam and Yang Huang). Presented at DIMACS Workshop on Clustering Problems in Biological Networks, Piscataway, NJ, May 9--11, 2006. APBC 2007. Journal of Bioinformatics and Computational Biology, Vol 6, No.1, 2008.

V. Choi. Yucca: An efficient algorithm for small molecule docking. Chemistry and Biodiversity, Issue 11, 2005, pp1517 -- 1524. Presented at the Symposium on Computational Methods in Drug Design, Switzerland, 2005.

V. Choi. On Updating Torsion Angles of Molecular Conformations. DIMACS Workshop on Information Processing by Protein Structures in Molecular Recognition, June 13-14 2005. Journal of Chemical Information and Modeling (formerly JCICS) 46 (1), 2006, pp438 -- 444.

Contact Info

E- Mail: vchoi@vt.edu

URL: http://people.cs.vt.edu/~vchoi/

Address:

Dr. Vicky Choi
Department of Computer Science
Virginia Polytechnic Institute and State University
Northern Virginia Center
7054 Haycock Road, Room 304
Falls Church, VA 22043

Telephone/Fax:

Telephone: (703) 538-3774
Fax:       (703) 538-8348